Thursday, February 21, 2013

Is evolution fairly predictable? A new study with E. coli suggests yes, forming the same solutions for the same problems in different populations.

Researchers started the experiment with 3 populations of E. coli. The bacteria in each population were generalists, competing for two different foods: glucose and acetate. After 1,200 generations, each population had split into two types, each specialised physiologically to either glucose or acetate. After analysing bacteria at 16 points over its evolution, the team found significant similarity in the changes that had occurred.

"In all three populations it seems to be more or less the same core set of genes that are causing the two phenotypes that we see... In a few cases, it's even the exact same genetic change," Matthew Herron (University of Montana) said. “There are about 4.5 million nucleotides in the E. coli genome. Finding in four cases that the exact same change had happened independently in different populations was intriguing.”

The team suggested that one particular form of selection, negative frequency dependence, played an important part. As the population of one type of specialised bacteria increases the amount of resources for them will decrease, giving bacteria who specialise in the alternate food an advantage.

Of course, there are important counterpoints. Bacteria such as E. coli produce asexually, so it may not be wise to extrapolate from these findings how sexually-reproducing organisms evolve. The large populations of bacteria may make their evolution more predictable than that of more dispersed species. The E. coli populations were also evolving in a stable environment, which could have an effect on any predictability.

To read the paper: http://bit.ly/12QFjdc

Photo credit: Mattosaurus, 2009.

http://www.nature.com/news/predictable-evolution-trumps-randomness-of-mutations-1.12459

http://www.sciencedaily.com/releases/2013/02/130219172155.htm

http://www.redorbit.com/news/science/1112788202/e-coli-bacteria-evolution-genome-prediction-022013/

http://www.eurekalert.org/pub_releases/2013-02/uobc-eod021213.php
Is evolution fairly predictable? A new study with E. coli suggests yes, forming the same solutions for the same problems in different populations.

Researchers started the experiment with 3 populations of E. coli. The bacteria in each population were generalists, competing for two different foods: glucose and acetate. After 1,200 generations, each population had split into two types, each specialised physiologically to either glucose or acetate. After analysing bacteria at 16 points over its evolution, the team found significant similarity in the changes that had occurred.

"In all three populations it seems to be more or less the same core set of genes that are causing the two phenotypes that we see... In a few cases, it's even the exact same genetic change," Matthew Herron (University of Montana) said. “There are about 4.5 million nucleotides in the E. coli genome. Finding in four cases that the exact same change had happened independently in different populations was intriguing.”

The team suggested that one particular form of selection, negative frequency dependence, played an important part. As the population of one type of specialised bacteria increases the amount of resources for them will decrease, giving bacteria who specialise in the alternate food an advantage.

Of course, there are important counterpoints. Bacteria such as E. coli produce asexually, so it may not be wise to extrapolate from these findings how sexually-reproducing organisms evolve. The large populations of bacteria may make their evolution more predictable than that of more dispersed species. The E. coli populations were also evolving in a stable environment, which could have an effect on any predictability. 

To read the paper: http://bit.ly/12QFjdc

Photo credit: Mattosaurus, 2009. 

http://www.nature.com/news/predictable-evolution-trumps-randomness-of-mutations-1.12459

http://www.sciencedaily.com/releases/2013/02/130219172155.htm

http://www.redorbit.com/news/science/1112788202/e-coli-bacteria-evolution-genome-prediction-022013/

http://www.eurekalert.org/pub_releases/2013-02/uobc-eod021213.php

No comments:

Post a Comment